STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56520.1YibE/F-like family protein. (345 aa)    
Predicted Functional Partners:
EJN56519.1
Putative multitransmembrane protein.
 
    0.969
EJN55648.1
Hypothetical protein.
 
     0.614
EJN56533.1
ABC-type antimicrobial peptide transport system, permease component.
  
     0.491
EJN56590.1
Alkaline phosphatase superfamily protein.
  
     0.469
EJN56521.1
GCN5-related N-acetyltransferase.
       0.458
EJN55912.1
Alkaline phosphatase superfamily protein.
  
     0.424
EJN56466.1
Glutamate synthase (NADH) large subunit.
       0.400
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.