STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56586.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
EJN55855.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 0.625
EJN55367.1
Hypothetical protein.
    
 0.588
EJN56705.1
N-acetylmuramoyl-L-alanine amidase; Cell wall hydrolase; Autolysin.
    
 0.588
A11Y_103
Phage lysin.
  
  
 0.519
murC
UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase); Cell wall formation; Belongs to the MurCDEF family.
    
 0.494
EJN55648.1
Hypothetical protein.
  
     0.478
adk
Adenylate kinase (AK); Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.470
EJN56588.1
Penicillin binding protein 2B.
     
 0.456
EJN56397.1
Penicillin binding protein 2B.
     
 0.456
EJN56170.1
Penicillin binding protein 1A.
     
 0.454
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.