STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56258.1Spermidine/putrescine ABC transporter, permease protein. (262 aa)    
Predicted Functional Partners:
A11Y_66229
ABC transporter, permease protein.
 
 0.998
EJN56224.1
Spermidine/putrescine-binding periplasmic protein.
 
 0.989
EJN56222.1
Spermidine/putrescine ABC transporter, permease protein.
 
 0.988
A11Y_50108
Spermidine/putrescine ABC transporter substrate-binding protein.
 
 
 0.985
A11Y_50087
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.983
ade-2
Adenase; Adenine aminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
     0.874
A11Y_54526
Sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.852
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.833
A11Y_54523
ABC superfamily ATP binding cassette transporter, permease protein.
 
 
0.817
A11Y_21927
Sulfate-transporting ATPase; Belongs to the ABC transporter superfamily.
 
 0.803
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.