STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN53375.1Putative bacterial type II secretion/competence system, ComEC-like protein. (737 aa)    
Predicted Functional Partners:
EJN53374.1
DCMP deaminase.
 
    0.918
EJN56234.1
Late competence protein ComGB, access of DNA to ComEA.
  
  
 0.861
EJN53376.1
DNA-directed DNA polymerase III, delta subunit.
 
   
 0.855
A11Y_23627
DNA protecting protein DprA.
 
  
 0.796
EJN55593.1
Putative bacterial type II secretion/competence system, ComFC-like protein.
 
  
 0.769
A11Y_79783
Putative competence protein.
 
  
 0.745
EJN56233.1
Hypothetical protein.
 
  
 0.740
EJN54248.1
Single-strand DNA-specific exonuclease RecJ.
     
 0.735
birA
Biotin operon repressor / biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.679
EJN55882.1
Cardiolipin synthase (CL synthase); Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 
 0.677
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.