STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN06498.1Alcohol dehydrogenase/hypothetical protein. (343 aa)    
Predicted Functional Partners:
SFN05888.1
2,5-diketo-D-gluconate reductase A.
   
 
 0.639
SFN06523.1
Uncharacterized conserved protein, tellurite resistance protein B (TerB) family.
       0.561
SFN03548.1
Putative intracellular protease/amidase.
 
    0.527
hisF
Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.470
hisE
phosphoribosyl-ATP pyrophosphatase.
       0.465
SFN07731.1
2,4-dienoyl-CoA reductase.
  
  
 0.458
SFM94842.1
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.446
Your Current Organism:
Thioclava dalianensis
NCBI taxonomy Id: 1185766
Other names: CGMCC 1.12325, LMG 27290, LMG:27290, MCCC 1A03957, T. dalianensis, Thioclava dalianensis Zhang et al. 2013, Thioclava sp. DLFJ1-1, strain DLFJ1-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.