STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN55778.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
SFN55801.1
Lrp/AsnC family transcriptional regulator.
       0.586
SFN55755.1
Hypothetical protein.
       0.488
Your Current Organism:
Thioclava dalianensis
NCBI taxonomy Id: 1185766
Other names: CGMCC 1.12325, LMG 27290, LMG:27290, MCCC 1A03957, T. dalianensis, Thioclava dalianensis Zhang et al. 2013, Thioclava sp. DLFJ1-1, strain DLFJ1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.