STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (214 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 0.995
IIF7_15515
Orotidine 5'-phosphate decarboxylase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0284 Orotidine-5'-phosphate decarboxylase.
  
 
 0.994
IIF7_10473
Carbamoyl-phosphate synthase large subunit; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 
 0.939
pyrB
Aspartate carbamoyltransferase catalytic subunit; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
 0.931
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
 
 0.924
upp
Uracil phosphoribosyltransferase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0035 Uracil phosphoribosyltransferase.
    
 0.923
carA
Carbamoyl phosphate synthase small subunit; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
 
  
 0.920
IIF7_10663
Uridine kinase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0572 Uridine kinase.
   
 0.916
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
    
 0.912
surE
5'(3')-nucleotidase/polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.906
Your Current Organism:
Zunongwangia atlantica
NCBI taxonomy Id: 1185767
Other names: Z. atlantica 22II14-10F7, Zunongwangia atlantica 22II14-10F7, Zunongwangia sp. 22II14-10F7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.