STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IIF7_18132PAP2 superfamily protein; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0671 Membrane-associated phospholipid phosphatase. (197 aa)    
Predicted Functional Partners:
IIF7_18097
Two-component system sensor histidine kinase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0642 Signal transduction histidine kinase.
 
     0.729
IIF7_18102
TonB-dependent outer membrane receptor; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected].
  
     0.663
IIF7_02200
O-succinylbenzoyl-CoA synthetase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
 0.651
IIF7_14883
Cytochrome P450; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG2124 Cytochrome P450.
   
  0.630
IIF7_18127
UDP-phosphate alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
 
    0.621
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.603
IIF7_18092
Two-component system response regulator; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
    0.593
IIF7_18107
Hypothetical protein; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected].
  
     0.571
IIF7_11318
L-2,4-diaminobutyrate decarboxylase; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
    
 0.547
IIF7_10243
Diacylglycerol kinase catalytic subunit; Bacteria available from Dr. Zongze Shao; The Third Institute of State Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian, 361005, China. Tel:86-592-2195390, [email protected]; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
 
 0.508
Your Current Organism:
Zunongwangia atlantica
NCBI taxonomy Id: 1185767
Other names: Z. atlantica 22II14-10F7, Zunongwangia atlantica 22II14-10F7, Zunongwangia sp. 22II14-10F7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.