STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293685_04488Unannotated protein. (677 aa)    
Predicted Functional Partners:
GCA_001293685_04489
Unannotated protein.
 
 0.995
GCA_001293685_04493
Unannotated protein.
 
 
 0.990
GCA_001293685_04490
Unannotated protein.
 
 0.982
GCA_001293685_03400
Unannotated protein.
 
 
 0.981
GCA_001293685_03388
Unannotated protein.
 0.980
GCA_001293685_03004
Unannotated protein.
   
 0.957
GCA_001293685_03516
Unannotated protein.
   
 0.957
GCA_001293685_04334
Unannotated protein.
 
 0.946
GCA_001293685_02201
Unannotated protein.
 
 0.921
GCA_001293685_01114
Unannotated protein.
 
 
 0.831
Your Current Organism:
Desulfatitalea tepidiphila
NCBI taxonomy Id: 1185843
Other names: D. tepidiphila, DSM 23472, Desulfatitalea tepidiphila Higashioka et al. 2013, NBRC 107166, strain S28bF, sulfate-reducing bacterium strain S28OL1, sulfate-reducing bacterium strain S28OL2, sulfate-reducing bacterium strain S28bF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.