STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompAOmpA/MotB domain protein. (451 aa)    
Predicted Functional Partners:
BN8_01886
OmpA/MotB domain protein.
  
     0.747
BN8_00206
Hypothetical protein.
       0.727
BN8_00204
Peptidoglycan-binding lysin domain protein.
 
     0.603
BN8_04236
Lytic transglycosylase catalytic.
  
     0.534
hppA
V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.
 
      0.527
BN8_02873
OmpA/MotB domain protein.
  
     0.523
BN8_00207
Hypothetical protein.
       0.495
BN8_00661
Membrane-bound lytic murein transglycosylase D.
  
     0.473
BN8_00031
Lytic transglycosylase catalytic.
  
     0.438
BN8_00032
Lytic transglycosylase catalytic.
  
     0.429
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.