STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_00346Multi-sensor signal transduction histidine kinase. (745 aa)    
Predicted Functional Partners:
BN8_03738
Multi-sensor hybrid histidine kinase.
 
 0.962
BN8_00348
Heme oxygenase-like protein.
 
     0.946
BN8_03739
PAS/PAC sensor hybrid histidine kinase.
 
 
0.917
BN8_03224
PAS/PAC sensor hybrid histidine kinase.
 
 
0.915
BN8_03319
Multi-sensor hybrid histidine kinase.
 
0.908
BN8_00347
Response regulator receiver protein.
 
 
   0.856
PAS
Multi-sensor hybrid histidine kinase.
 
 
0.854
BN8_02721
Multi-sensor hybrid histidine kinase.
 
 
0.853
BN8_00474
GAF sensor hybrid histidine kinase.
 
 
0.850
BN8_04381
Multi-sensor hybrid histidine kinase.
 
 
0.848
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.