STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_00565Hypothetical protein. (256 aa)    
Predicted Functional Partners:
BN8_00566
Oxidoreductase molybdopterin binding protein.
 
  0.968
BN8_02287
Sulfite reductase (NADPH) flavoprotein alpha-component.
     
 0.783
BN8_01764
Hypothetical protein.
  
     0.683
BN8_05681
Putative iron-sulfur binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.578
BN8_02125
40-residue YVTN family beta-propeller repeat protein.
  
  
  0.574
BN8_02977
Hypothetical protein.
  
     0.554
fdhF
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.545
BN8_00564
enoyl-CoA hydratase.
       0.523
BN8_02730
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.468
BN8_00481
40-residue YVTN family beta-propeller repeat protein.
  
  
  0.462
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.