STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_00756Glycoside hydrolase family 16. (274 aa)    
Predicted Functional Partners:
BN8_00755
Putative esterase.
 
     0.717
BN8_00911
Glucuronoxylanase xynC; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.712
BN8_06489
Hypothetical protein.
      0.555
BN8_03129
Glucan endo-1,6-beta-glucosidase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.533
BN8_00757
Hypothetical protein.
       0.516
BN8_00754
Putative esterase.
       0.465
BN8_05053
Chitin-binding protein.
  
  
 0.430
BN8_03206
Beta-hexosaminidase.
  
  
  0.422
BN8_01000
Beta-N-acetylhexosaminidase.
  
  
  0.415
BN8_00652
Beta-N-acetylhexosaminidase.
  
  
  0.406
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.