STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_02268Protein of unknown function DUF1080. (263 aa)    
Predicted Functional Partners:
BN8_03812
Glucose/sorbosone dehydrogenase-like protein.
 
     0.750
BN8_01964
Membrane-bound dehydrogenase domain protein.
  
     0.678
BN8_06508
Blue (type 1) copper domain protein.
 
     0.634
BN8_05100
Cytochrome c class I.
 
     0.599
BN8_06507
Hypothetical protein.
  
     0.560
BN8_03202
Membrane-bound dehydrogenase domain protein.
  
     0.545
BN8_02269
Amidohydrolase.
 
     0.539
BN8_03968
Hypothetical protein.
  
     0.508
BN8_02426
Protein of unknown function DUF1080.
  
     0.499
gdhP
Membrane-bound dehydrogenase domain protein.
  
     0.496
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.