STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_02583Domain of unknown function DUF2382-like protein. (139 aa)    
Predicted Functional Partners:
BN8_02582
Hypothetical protein.
 
     0.921
BN8_06375
Glycosyl hydrolase family 98 putative carbohydrate binding module.
  
     0.675
BN8_05325
Hypothetical protein.
  
     0.668
BN8_03011
Hypothetical protein.
    
 
 0.655
BN8_02425
Binding-protein-dependent transport systems inner membrane component.
  
    0.599
BN8_03229
Sulfate transporter/antisigma-factor antagonist STAS.
   
    0.579
BN8_04518
Amine oxidase.
  
     0.570
BN8_02499
Hypothetical protein.
  
     0.552
rfbD
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
  
     0.538
BN8_06053
Glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
     0.534
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.