STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_02729Major facilitator superfamily MFS_1. (433 aa)    
Predicted Functional Partners:
BN8_02726
Nitrite reductase (NAD(P)H), large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.991
BN8_02730
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.990
BN8_02724
Nitrite reductase (NAD(P)H), small subunit.
 
 
 0.975
BN8_06151
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.875
BN8_02731
Rubredoxin-type Fe(Cys)4 protein.
 
     0.842
BN8_02728
Hypothetical protein.
 
     0.838
BN8_05744
Oxidoreductase FAD/NAD(P)-binding domain protein.
     
 0.758
BN8_05759
Oxidoreductase FAD/NAD(P)-binding domain protein.
     
 0.758
BN8_03652
Phage major capsid protein, HK97 family.
   
    0.743
BN8_02092
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.628
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.