STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_02791Hypothetical protein. (139 aa)    
Predicted Functional Partners:
BN8_02789
Hypothetical protein.
       0.773
BN8_02790
Rieske (2Fe-2S) iron-sulphur domain protein.
       0.773
BN8_02792
Hypothetical protein.
       0.648
BN8_02793
Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.648
BN8_02794
Glycogen debranching enzyme.
       0.639
BN8_02795
Hypothetical protein.
       0.639
gdh1
Short-chain dehydrogenase/reductase SDR.
       0.573
BN8_02797
Gluconolactonase.
       0.569
BN8_02798
Protein of unknown function DUF336.
       0.569
BN8_02799
YHS domain protein.
       0.452
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.