STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_03764Haloacid dehalogenase domain protein hydrolase. (244 aa)    
Predicted Functional Partners:
BN8_03763
FAD dependent oxidoreductase TIGR03364.
     0.909
otsA
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
 0.765
BN8_03751
Hypothetical protein.
 
     0.698
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
 
  0.693
BN8_03908
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.685
BN8_01087
Competence/damage-inducible protein CinA; Belongs to the CinA family.
    
  0.649
BN8_03756
Metal dependent phosphohydrolase.
 
    0.622
BN8_01536
Trehalose synthase.
   
 
 0.615
hisB
Histidinol-phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
 0.566
BN8_00847
D-lactate dehydrogenase (cytochrome).
    
  0.544
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.