STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_04310Glycosyl hydrolase family 32 domain protein; Belongs to the glycosyl hydrolase 32 family. (511 aa)    
Predicted Functional Partners:
BN8_04307
PfkB domain protein.
 
 0.975
BN8_04506
PfkB domain protein.
 
 
 0.918
BN8_04130
ROK family protein.
  
 
 0.867
BN8_04309
Hypothetical protein.
 
     0.853
BN8_04308
Hypothetical protein.
 
     0.754
BN8_04302
Putative two-component system sensor kinase/response regulator fusion protein.
 
    0.634
BN8_04306
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     0.601
BN8_01185
Hypothetical protein.
  
     0.541
BN8_03183
Mannitol dehydrogenase domain protein.
     
 0.524
BN8_03130
Glycoside hydrolase clan GH-D.
 
  
 0.520
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.