STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUSBBeta-glucuronidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (525 aa)    
Predicted Functional Partners:
BN8_04388
Hypothetical protein.
 
     0.950
BN8_04389
Putative transmembrane protein precursor.
 
     0.950
BN8_04386
Glycosyl transferase, group 1.
 
     0.930
wcaA
Glycosyl transferase family 2.
 
     0.868
BN8_04383
TPR repeat protein.
  
     0.775
BN8_04385
Polysaccharide biosynthesis protein.
  
     0.775
BN8_00911
Glucuronoxylanase xynC; Belongs to the glycosyl hydrolase 30 family.
    
 0.733
BN8_04863
FIST C domain protein.
  
     0.561
BN8_02289
Putative ankyrin repeat protein RF_0381.
  
     0.514
BN8_02288
Hypothetical protein.
  
     0.457
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.