STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (382 aa)    
Predicted Functional Partners:
BN8_04818
Aldose 1-epimerase.
  
 0.961
BN8_02476
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.951
BN8_00694
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.949
mro
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.945
BN8_00303
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.924
BN8_05263
Hypothetical protein.
  
 0.905
BN8_01524
GHMP kinase domain protein; Belongs to the GHMP kinase family.
  
  
 
0.806
mvk
Galactokinase; Belongs to the GHMP kinase family.
  
  
 
0.798
bga
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.711
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.651
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.