STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_05202Hypothetical protein. (342 aa)    
Predicted Functional Partners:
BN8_05203
Hypothetical protein.
   
 
0.795
BN8_05206
Hypothetical protein.
       0.778
BN8_05204
Hypothetical protein.
       0.777
BN8_05205
Hypothetical protein.
       0.777
BN8_01148
S-adenosylmethionine decarboxylase proenzyme Short=AdoMetDC; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
    
 0.762
BN8_03036
Putative protein with a von Willebrand factor type A (vWA) domain-like protein.
    
   0.616
BN8_01704
Amidohydrolase.
  
 
  0.458
BN8_02452
Hypothetical protein; Nucleoside phosphorylase.
  
     0.455
mtnK
Methylthioribose kinase.
     
 0.455
BN8_05201
Transposase; Required for the transposition of the insertion element.
       0.454
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.