STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_05734Hypothetical protein. (310 aa)    
Predicted Functional Partners:
BN8_01822
Transferase, putative.
 
     0.781
BN8_01824
Hypothetical protein.
  
     0.719
BN8_03857
Hypothetical protein.
  
     0.695
BN8_01823
WbqC-like family protein.
 
    0.617
BN8_06293
Protein of unknown function DUF303 acetylesterase putative.
  
     0.617
BN8_01828
Hypothetical protein.
  
     0.601
BN8_04679
Hypothetical protein.
  
     0.592
BN8_06263
PKD domain containing protein.
  
     0.591
BN8_02671
Lysine exporter protein (LYSE/YGGA).
  
     0.584
BN8_04324
Hypothetical protein.
  
     0.580
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.