STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_06644Protein of unknown function DUF785. (171 aa)    
Predicted Functional Partners:
BN8_06643
alpha-L-glutamate ligase, RimK family; Belongs to the RimK family.
 
     0.916
BN8_06645
DNA polymerase III gamma/tau subunits-like protein.
       0.795
BN8_06646
Hypothetical protein.
       0.791
BN8_02707
Hypothetical protein.
 
     0.744
BN8_06647
Hypothetical protein.
       0.540
kefA
Potassium efflux system kefA Short=Protein aefA.
 
     0.438
BN8_06642
Hypothetical protein.
       0.409
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.