STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8_06666Hypothetical protein. (827 aa)    
Predicted Functional Partners:
BN8_03843
Peptidase M14 carboxypeptidase A.
  
     0.726
BN8_06275
Amidohydrolase.
  
     0.708
BN8_00101
Xaa-Pro aminopeptidase family enzyme.
  
     0.608
BN8_01172
Amidohydrolase.
  
     0.530
BN8_02149
Peptidase S10 serine carboxypeptidase.
  
     0.495
BN8_06665
Signal transduction histidine kinase, LytS.
       0.488
BN8_06518
Peptidase M28.
  
     0.477
BN8_03384
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.465
BN8_06667
Hypothetical protein.
       0.452
BN8_01019
Peptidase S9 prolyl oligopeptidase active site domain protein.
  
     0.444
Your Current Organism:
Fibrisoma limi
NCBI taxonomy Id: 1185876
Other names: F. limi BUZ 3, Fibrisoma limi BUZ 3, Fibrisoma limi str. BUZ 3, Fibrisoma limi strain BUZ 3, Flexibacteraceae bacterium BUZ 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.