STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP72974.1Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. (336 aa)    
Predicted Functional Partners:
SEP73031.1
Predicted phosphohydrolase or phosphomutase, AlkP superfamily.
 
     0.865
SEP75781.1
Phage integrase, N-terminal SAM-like domain.
  
     0.681
SEQ79611.1
Rhodanese-related sulfurtransferase.
  
     0.609
SEQ97430.1
Hypothetical protein.
  
     0.602
SEQ54597.1
Hypothetical protein.
 
     0.564
SER18751.1
Predicted DNA binding protein, contains HTH domain.
  
     0.558
SEQ46520.1
Intracellular proteinase inhibitor.
  
     0.538
SEP73979.1
Hypothetical protein.
 
     0.530
SER12222.1
Arylsulfotransferase (ASST).
  
     0.530
SER57344.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
  
     0.527
Your Current Organism:
Natrinema salaciae
NCBI taxonomy Id: 1186196
Other names: CECT 8172, DSM 25055, JCM 17869, N. salaciae, Natrinema salaciae Albuquerque et al. 2012, Natrinema sp. MDB20, Natrinema sp. MDB25, strain MDB25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.