STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A33M_2834HigA protein (antitoxin to HigB). (104 aa)    
Predicted Functional Partners:
A33M_2833
HigB toxin protein.
 
 
 
 0.986
A33M_4435
HigB toxin protein.
 
 
 
 0.816
A33M_1639
HigB toxin protein.
 
 
 
 0.802
A33M_0026
HigB toxin protein.
 
 
 
 0.785
A33M_4434
HigA protein (antitoxin to HigB).
  
     0.774
A33M_0027
HigA protein (antitoxin to HigB).
  
     0.765
A33M_3313
HigB toxin protein.
 
 
 
 0.755
A33M_2832
3-oxoacyl-[acyl-carrier protein] reductase.
       0.465
Your Current Organism:
Rhodovulum sp. PH10
NCBI taxonomy Id: 1187851
Other names: R. sp. PH10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.