STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like. (499 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.961
COLGALT2
Procollagen galactosyltransferase 2 isoform X1.
   
0.944
COLGALT1
Procollagen galactosyltransferase 1.
   
0.944
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
  
 
 
0.942
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.900
LOC103086765
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like.
 
      0.899
SETD7
Histone-lysine N-methyltransferase SETD7-like isoform X1.
   
 0.706
SMYD3
Histone-lysine N-methyltransferase SMYD3 isoform X1.
   
 0.684
EHMT1
Histone-lysine N-methyltransferase EHMT1.
    
  0.681
EHMT2
Histone-lysine N-methyltransferase EHMT2-like isoform X1.
    
  0.681
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.