STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1. (628 aa)    
Predicted Functional Partners:
VPRBP
Protein VPRBP.
    
 
 0.957
SERINC5
Serine incorporator 5.
      
 0.762
CD4
T-cell surface glycoprotein CD4.
      
 0.739
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
      
 0.713
APOBEC3B
DNA dC->dU-editing enzyme APOBEC-3B.
      
 0.687
CUL4A
cullin-4A; Belongs to the cullin family.
    
 
 0.626
SERINC3
Serine incorporator 3.
      
 0.615
CDK1
Cyclin-dependent kinase 1-like isoform X1; Belongs to the protein kinase superfamily.
    
 
 0.614
CCNA2
cyclin-A2; Belongs to the cyclin family.
    
 
 0.608
RNASEH2C
Ribonuclease H2 subunit C.
      
 0.597
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.