STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLR5LOW QUALITY PROTEIN: toll-like receptor 5; Belongs to the Toll-like receptor family. (858 aa)    
Predicted Functional Partners:
MYD88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.989
TLR4
Toll-like receptor 4; Belongs to the Toll-like receptor family.
   
 
0.953
LOC103090179
Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family.
   
0.950
NFKB1
Nuclear factor NF-kappa-B p105 subunit isoform X1.
   
 0.931
RELA
Transcription factor p65 isoform X1.
   
 0.923
LY96
Lymphocyte antigen 96.
   
 0.807
TIRAP
Toll/interleukin-1 receptor domain-containing adapter protein.
   
 0.777
UNC93B1
Protein unc-93 homolog B1.
    
 0.763
CD4
T-cell surface glycoprotein CD4.
   
 0.739
LOC103088795
TNF receptor-associated factor 6-like.
   
 0.657
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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