Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD4 | LOC103088795 | A0A340Y8J8 | A0A340WUE8 | T-cell surface glycoprotein CD4. | TNF receptor-associated factor 6-like. | 0.527 |
CD4 | LOC103090179 | A0A340Y8J8 | A0A340XZG7 | T-cell surface glycoprotein CD4. | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | 0.858 |
CD4 | MYD88 | A0A340Y8J8 | A0A340XN04 | T-cell surface glycoprotein CD4. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.849 |
CD4 | RELA | A0A340Y8J8 | A0A340XKW6 | T-cell surface glycoprotein CD4. | Transcription factor p65 isoform X1. | 0.563 |
CD4 | TLR4 | A0A340Y8J8 | A0A340WRS6 | T-cell surface glycoprotein CD4. | Toll-like receptor 4; Belongs to the Toll-like receptor family. | 0.874 |
CD4 | TLR5 | A0A340Y8J8 | A0A340WT86 | T-cell surface glycoprotein CD4. | LOW QUALITY PROTEIN: toll-like receptor 5; Belongs to the Toll-like receptor family. | 0.739 |
LOC103088795 | CD4 | A0A340WUE8 | A0A340Y8J8 | TNF receptor-associated factor 6-like. | T-cell surface glycoprotein CD4. | 0.527 |
LOC103088795 | LOC103090179 | A0A340WUE8 | A0A340XZG7 | TNF receptor-associated factor 6-like. | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | 0.604 |
LOC103088795 | LY96 | A0A340WUE8 | A0A340X3A3 | TNF receptor-associated factor 6-like. | Lymphocyte antigen 96. | 0.704 |
LOC103088795 | MYD88 | A0A340WUE8 | A0A340XN04 | TNF receptor-associated factor 6-like. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.992 |
LOC103088795 | NFKB1 | A0A340WUE8 | A0A340XX52 | TNF receptor-associated factor 6-like. | Nuclear factor NF-kappa-B p105 subunit isoform X1. | 0.573 |
LOC103088795 | RELA | A0A340WUE8 | A0A340XKW6 | TNF receptor-associated factor 6-like. | Transcription factor p65 isoform X1. | 0.656 |
LOC103088795 | TIRAP | A0A340WUE8 | A0A340XWF4 | TNF receptor-associated factor 6-like. | Toll/interleukin-1 receptor domain-containing adapter protein. | 0.967 |
LOC103088795 | TLR4 | A0A340WUE8 | A0A340WRS6 | TNF receptor-associated factor 6-like. | Toll-like receptor 4; Belongs to the Toll-like receptor family. | 0.948 |
LOC103088795 | TLR5 | A0A340WUE8 | A0A340WT86 | TNF receptor-associated factor 6-like. | LOW QUALITY PROTEIN: toll-like receptor 5; Belongs to the Toll-like receptor family. | 0.657 |
LOC103090179 | CD4 | A0A340XZG7 | A0A340Y8J8 | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | T-cell surface glycoprotein CD4. | 0.858 |
LOC103090179 | LOC103088795 | A0A340XZG7 | A0A340WUE8 | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | TNF receptor-associated factor 6-like. | 0.604 |
LOC103090179 | LY96 | A0A340XZG7 | A0A340X3A3 | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | Lymphocyte antigen 96. | 0.903 |
LOC103090179 | MYD88 | A0A340XZG7 | A0A340XN04 | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.988 |
LOC103090179 | NFKB1 | A0A340XZG7 | A0A340XX52 | Toll-like receptor 2-like isoform X1; Belongs to the Toll-like receptor family. | Nuclear factor NF-kappa-B p105 subunit isoform X1. | 0.946 |
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