STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM10RNA-binding protein 10 isoform X1. (995 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.960
SUGP1
SURP and G-patch domain-containing protein 1.
   
0.951
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.948
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.933
GPKOW
G patch domain and KOW motifs-containing protein.
   
 
 0.891
LOC103069655
G patch domain and KOW motifs-containing protein-like.
   
 
 0.891
LUC7L3
Luc7-like protein 3 isoform X1.
   
 0.772
PRCC
Proline-rich protein PRCC.
   
 
 0.769
RBM17
Splicing factor 45.
   
 
 0.723
SRRT
Serrate RNA effector molecule homolog isoform X2.
   
 
  0.695
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.