STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF4Protein YIPF. (244 aa)    
Predicted Functional Partners:
YIF1B
Protein YIF1B isoform X1.
   
 
 0.857
YIPF2
Protein YIPF.
   
 
 0.821
YIPF1
Protein YIPF.
   
 
 0.812
YIPF3
Protein YIPF.
   
 
 0.648
CD8A
T-cell surface glycoprotein CD8 alpha chain.
   
  
 0.629
YIF1A
Protein YIF1A.
   
 
 0.604
ZNF605
LOW QUALITY PROTEIN: zinc finger protein 605.
      
 0.555
FRMD5
FERM domain-containing protein 5 isoform X1.
   
  
 0.519
PPP1R12A
Protein phosphatase 1 regulatory subunit.
    
 
 0.507
LOC103083048
Protein phosphatase 1 regulatory subunit 12A-like.
    
 
 0.507
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.