STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103074493Glutamate receptor ionotropic, kainate 3-like isoform X1. (963 aa)    
Predicted Functional Partners:
GRIK5
Glutamate receptor ionotropic, kainate 5.
  
 
0.803
GRIK4
Glutamate receptor ionotropic, kainate 4.
  
 
0.801
BRAF
Serine/threonine-protein kinase B-raf.
    
 
 0.616
PLAC8L1
PLAC8-like protein 1.
      
 0.613
GRIK2
Glutamate receptor ionotropic, kainate 2-like isoform X1.
  
0.610
LOC103069170
Glutamate receptor ionotropic, kainate 1-like isoform X1.
  
0.610
DLG4
Disks large homolog 4 isoform X1; Belongs to the MAGUK family.
   
 0.596
DLG3
Disks large homolog 3 isoform X1; Belongs to the MAGUK family.
   
 0.596
PLCB1
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
   
 
 0.586
GNG13
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
   
 
 0.560
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.