STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD1Bromodomain-containing protein 1 isoform X2. (1187 aa)    
Predicted Functional Partners:
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.949
MEAF6
Chromatin modification-related protein MEAF6 isoform X3.
    
 0.888
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.842
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.797
BRPF3
Bromodomain and PHD finger-containing protein 3.
  
0.746
ING5
Inhibitor of growth protein.
    
 0.740
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.699
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.687
CHD4
chromodomain-helicase-DNA-binding protein 4.
   
 0.677
ING4
Inhibitor of growth protein.
    
 0.665
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.