STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103079694Threonine synthase-like. (332 aa)    
Predicted Functional Partners:
LOC103077475
Homoserine dehydrogenase.
  
 0.935
PSPH
Phosphoserine phosphatase.
   
 0.767
HDDC3
guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1.
  
 
 0.707
LOC103073331
Threonine dehydratase.
  
 
 0.663
SRR
Serine racemase.
  
 
 0.627
SDS
L-serine dehydratase/L-threonine deaminase.
  
 
 0.617
SDSL
Serine dehydratase-like.
  
 
 0.617
UGCG
Ceramide glucosyltransferase.
  
 
 0.610
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.596
LOC103081833
Serine--pyruvate aminotransferase.
  
 0.531
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.