LRIG2 protein (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LRIG2

Leucine-rich repeats and immunoglobulin-like domains protein 2. (1065 aa)

Predicted Functional Partners:

MET

0.753

MST1R

0.734

LOC103075745

0.707

KLHL31

0.630

TINAG

0.619

LPHN3

0.606

LPHN2

0.606

LPHN1

0.606

CNPY4

0.567

PCGF6

0.551

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNPY4	LRIG2	A0A340YBX4	A0A340XIJ4	Protein canopy homolog 4.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.567
KLHL31	LOC103075745	A0A340XL63	A0A340XMM3	Kelch-like protein 31.	Tudor domain-containing protein 3-like isoform X1.	0.619
KLHL31	LRIG2	A0A340XL63	A0A340XIJ4	Kelch-like protein 31.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.630
KLHL31	TINAG	A0A340XL63	A0A340XNI6	Kelch-like protein 31.	Tubulointerstitial nephritis antigen; Belongs to the peptidase C1 family.	0.508
LOC103075745	KLHL31	A0A340XMM3	A0A340XL63	Tudor domain-containing protein 3-like isoform X1.	Kelch-like protein 31.	0.619
LOC103075745	LRIG2	A0A340XMM3	A0A340XIJ4	Tudor domain-containing protein 3-like isoform X1.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.707
LOC103075745	TINAG	A0A340XMM3	A0A340XNI6	Tudor domain-containing protein 3-like isoform X1.	Tubulointerstitial nephritis antigen; Belongs to the peptidase C1 family.	0.619
LPHN1	LRIG2	A0A340Y9L7	A0A340XIJ4	Latrophilin-1 isoform X1; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.606
LPHN2	LRIG2	A0A340WIT7	A0A340XIJ4	Latrophilin-2-like; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.606
LPHN3	LRIG2	A0A340WGH1	A0A340XIJ4	Latrophilin-3-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeats and immunoglobulin-like domains protein 2.	0.606
LRIG2	CNPY4	A0A340XIJ4	A0A340YBX4	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Protein canopy homolog 4.	0.567
LRIG2	KLHL31	A0A340XIJ4	A0A340XL63	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Kelch-like protein 31.	0.630
LRIG2	LOC103075745	A0A340XIJ4	A0A340XMM3	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Tudor domain-containing protein 3-like isoform X1.	0.707
LRIG2	LPHN1	A0A340XIJ4	A0A340Y9L7	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Latrophilin-1 isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.606
LRIG2	LPHN2	A0A340XIJ4	A0A340WIT7	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Latrophilin-2-like; Belongs to the G-protein coupled receptor 2 family.	0.606
LRIG2	LPHN3	A0A340XIJ4	A0A340WGH1	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Latrophilin-3-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.606
LRIG2	MET	A0A340XIJ4	A0A340WMU0	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Hepatocyte growth factor receptor isoform X1.	0.753
LRIG2	MST1R	A0A340XIJ4	A0A340XYU1	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Macrophage-stimulating protein receptor.	0.734
LRIG2	PCGF6	A0A340XIJ4	A0A340YDI1	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Polycomb group RING finger protein 6 isoform X1.	0.551
LRIG2	TINAG	A0A340XIJ4	A0A340XNI6	Leucine-rich repeats and immunoglobulin-like domains protein 2.	Tubulointerstitial nephritis antigen; Belongs to the peptidase C1 family.	0.619