Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAG6 | GET4 | A0A340XKS1 | A0A340Y0F8 | Large proline-rich protein BAG6 isoform X3. | Golgi to ER traffic protein 4 homolog. | 0.966 |
BAG6 | RNF115 | A0A340XKS1 | A0A340XJG7 | Large proline-rich protein BAG6 isoform X3. | E3 ubiquitin-protein ligase RNF115. | 0.781 |
GET4 | BAG6 | A0A340Y0F8 | A0A340XKS1 | Golgi to ER traffic protein 4 homolog. | Large proline-rich protein BAG6 isoform X3. | 0.966 |
GET4 | RNF115 | A0A340Y0F8 | A0A340XJG7 | Golgi to ER traffic protein 4 homolog. | E3 ubiquitin-protein ligase RNF115. | 0.501 |
LOC103083100 | RNF115 | A0A340WP71 | A0A340XJG7 | ubiquitin-60S ribosomal protein L40-like. | E3 ubiquitin-protein ligase RNF115. | 0.504 |
LOC103083100 | SBDS | A0A340WP71 | A0A340X0S8 | ubiquitin-60S ribosomal protein L40-like. | Ribosome maturation protein SBDS. | 0.844 |
LOC103083100 | UBA52 | A0A340WP71 | A0A340XP85 | ubiquitin-60S ribosomal protein L40-like. | ubiquitin-60S ribosomal protein L40. | 0.901 |
LRRN3 | RNF115 | A0A340WH87 | A0A340XJG7 | Leucine-rich repeat neuronal protein 3-like. | E3 ubiquitin-protein ligase RNF115. | 0.717 |
LRRN3 | SBDS | A0A340WH87 | A0A340X0S8 | Leucine-rich repeat neuronal protein 3-like. | Ribosome maturation protein SBDS. | 0.507 |
LRRN3 | SLC9A3R1 | A0A340WH87 | A0A340X5S5 | Leucine-rich repeat neuronal protein 3-like. | Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. | 0.573 |
NSFL1C | RNF115 | A0A340Y1Y3 | A0A340XJG7 | NSFL1 cofactor p47 isoform X2. | E3 ubiquitin-protein ligase RNF115. | 0.526 |
RNF115 | BAG6 | A0A340XJG7 | A0A340XKS1 | E3 ubiquitin-protein ligase RNF115. | Large proline-rich protein BAG6 isoform X3. | 0.781 |
RNF115 | GET4 | A0A340XJG7 | A0A340Y0F8 | E3 ubiquitin-protein ligase RNF115. | Golgi to ER traffic protein 4 homolog. | 0.501 |
RNF115 | LOC103083100 | A0A340XJG7 | A0A340WP71 | E3 ubiquitin-protein ligase RNF115. | ubiquitin-60S ribosomal protein L40-like. | 0.504 |
RNF115 | LRRN3 | A0A340XJG7 | A0A340WH87 | E3 ubiquitin-protein ligase RNF115. | Leucine-rich repeat neuronal protein 3-like. | 0.717 |
RNF115 | NSFL1C | A0A340XJG7 | A0A340Y1Y3 | E3 ubiquitin-protein ligase RNF115. | NSFL1 cofactor p47 isoform X2. | 0.526 |
RNF115 | RSPO1 | A0A340XJG7 | A0A340X1R3 | E3 ubiquitin-protein ligase RNF115. | R-spondin-1. | 0.521 |
RNF115 | SBDS | A0A340XJG7 | A0A340X0S8 | E3 ubiquitin-protein ligase RNF115. | Ribosome maturation protein SBDS. | 0.690 |
RNF115 | SLC9A3R1 | A0A340XJG7 | A0A340X5S5 | E3 ubiquitin-protein ligase RNF115. | Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. | 0.658 |
RNF115 | TMLHE | A0A340XJG7 | A0A340Y5N5 | E3 ubiquitin-protein ligase RNF115. | Trimethyllysine dioxygenase, mitochondrial isoform X1. | 0.506 |
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