STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4939S ribosomal protein L49, mitochondrial isoform X2. (166 aa)    
Predicted Functional Partners:
MRPL15
LOW QUALITY PROTEIN: mitochondrial ribosomal protein L15.
   
 
 0.990
DAP3
28S ribosomal protein S29, mitochondrial isoform X1.
   
 
 0.985
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
 
 0.985
MRPL43
LOW QUALITY PROTEIN: 39S ribosomal protein L43, mitochondrial.
   
 
 0.985
MRPL57
Ribosomal protein 63, mitochondrial.
   
 
 0.984
LOC103088379
50S ribosomal protein L4, chloroplastic-like.
   
 
 0.983
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.983
LOC103068796
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.982
MRPL27
39S ribosomal protein L27, mitochondrial.
   
   0.980
MRPL44
39S ribosomal protein L44, mitochondrial.
   
 
 0.977
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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