STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR2Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2. (766 aa)    
Predicted Functional Partners:
RNMT
mRNA cap guanine-N7 methyltransferase.
      
 0.736
ZNF22
Zinc finger protein 22.
      
 0.729
DXO
Decapping and exoribonuclease protein isoform X1.
      
 0.722
LOC103074545
mRNA-capping enzyme-like.
   
  
 0.696
RNGTT
mRNA-capping enzyme.
   
  
 0.696
GPATCH2
G patch domain-containing protein 2.
      
 0.688
GCN1L1
Translational activator GCN1.
      
 0.613
TRMT13
tRNA:m(4)X modification enzyme TRM13 homolog.
   
  
 0.542
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
      
 0.536
FAM161B
Protein FAM161B isoform X2.
      
 0.532
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.