STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP10BPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1463 aa)    
Predicted Functional Partners:
LOC103070721
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.747
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.647
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.471
KRT84
LOW QUALITY PROTEIN: keratin, type II cuticular Hb4; Belongs to the intermediate filament family.
   
 
 0.458
LOC103081133
LOW QUALITY PROTEIN: calpain-8-like; Belongs to the peptidase C2 family.
   
  
 0.451
PLN
Cardiac phospholamban; Reversibly inhibits the activity of ATP2A2 in cardiac sarcoplasmic reticulum by decreasing the apparent affinity of the ATPase for Ca(2+). Modulates the contractility of the heart muscle in response to physiological stimuli via its effects on ATP2A2. Modulates calcium re-uptake during muscle relaxation and plays an important role in calcium homeostasis in the heart muscle. The degree of ATP2A2 inhibition depends on the oligomeric state of PLN.
    
 0.442
TMPRSS11D
Transmembrane protease serine; Belongs to the peptidase S1 family.
    
 
 0.440
CXCL17
VEGF coregulated chemokine 1.
      
 0.439
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.