STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB1LIM domain-binding protein 1 isoform X1. (411 aa)    
Predicted Functional Partners:
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.989
LMO2
Rhombotin-2.
    
 0.983
GATA1
Erythroid transcription factor.
    
 0.893
LHX3
LIM/homeobox protein Lhx3 isoform X1.
    
 0.815
ISL1
Insulin gene enhancer protein ISL-1.
    
 0.805
LHX2
LIM/homeobox protein Lhx2.
    
 0.797
LMO3
LOW QUALITY PROTEIN: LIM domain only protein 3.
    
 0.774
LMO1
Rhombotin-1 isoform X1.
    
 0.774
SSBP3
Single-stranded DNA-binding protein 3 isoform X1.
   
 
 0.747
LHX9
LIM/homeobox protein Lhx9 isoform X1.
    
 0.740
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.