STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD2Leiomodin-2. (543 aa)    
Predicted Functional Partners:
NEB
Nebulin-like.
   
 0.725
TNNI2
Troponin I, fast skeletal muscle.
   
 
 0.663
MYOZ2
Myozenin-2 isoform X1.
   
  
 0.644
LOC103088449
Myosin regulatory light chain 2, skeletal muscle isoform type 2-like.
   
 
 0.611
KLHL40
Kelch-like protein 40.
   
 
 0.572
ASB15
Ankyrin repeat and SOCS box protein 15.
   
 
 0.571
CSRP3
Cysteine and glycine-rich protein 3.
   
  
 0.567
KLHL41
Kelch-like protein 41.
   
 
 0.558
MCTP2
Multiple C2 and transmembrane domain-containing protein 2-like.
      
 0.539
MYL4
Myosin light chain 4 isoform X1.
   
 
 0.534
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.