Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEST1 | MERTK | A0A340XLF1 | A0A340YFQ2 | Bestrophin; Forms calcium-sensitive chloride channels. Permeable to bicarbonate; Belongs to the bestrophin family. | Tyrosine-protein kinase Mer. | 0.742 |
C1QA | CX3CR1 | A0A340XCQ9 | A0A340Y3E5 | Complement C1q subcomponent subunit A. | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.630 |
C1QA | GAS6 | A0A340XCQ9 | A0A340XYG8 | Complement C1q subcomponent subunit A. | Growth arrest-specific protein 6. | 0.692 |
C1QA | MERTK | A0A340XCQ9 | A0A340YFQ2 | Complement C1q subcomponent subunit A. | Tyrosine-protein kinase Mer. | 0.736 |
C1QA | P2RY12 | A0A340XCQ9 | A0A340WDN6 | Complement C1q subcomponent subunit A. | LOW QUALITY PROTEIN: P2Y purinoceptor 12. | 0.756 |
C1QA | PROS1 | A0A340XCQ9 | A0A340XPD8 | Complement C1q subcomponent subunit A. | Vitamin K-dependent protein S. | 0.729 |
C1QA | TMEM119 | A0A340XCQ9 | A0A340WMQ4 | Complement C1q subcomponent subunit A. | Transmembrane protein 119. | 0.756 |
C1QA | TREM2 | A0A340XCQ9 | A0A340XA19 | Complement C1q subcomponent subunit A. | Triggering receptor expressed on myeloid cells 2. | 0.827 |
CX3CR1 | C1QA | A0A340Y3E5 | A0A340XCQ9 | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | Complement C1q subcomponent subunit A. | 0.630 |
CX3CR1 | GAS6 | A0A340Y3E5 | A0A340XYG8 | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | Growth arrest-specific protein 6. | 0.447 |
CX3CR1 | MERTK | A0A340Y3E5 | A0A340YFQ2 | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | Tyrosine-protein kinase Mer. | 0.694 |
CX3CR1 | TMEM119 | A0A340Y3E5 | A0A340WMQ4 | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | Transmembrane protein 119. | 0.768 |
CX3CR1 | TREM2 | A0A340Y3E5 | A0A340XA19 | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | Triggering receptor expressed on myeloid cells 2. | 0.780 |
GAS6 | C1QA | A0A340XYG8 | A0A340XCQ9 | Growth arrest-specific protein 6. | Complement C1q subcomponent subunit A. | 0.692 |
GAS6 | CX3CR1 | A0A340XYG8 | A0A340Y3E5 | Growth arrest-specific protein 6. | CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.447 |
GAS6 | MEGF10 | A0A340XYG8 | A0A340XF72 | Growth arrest-specific protein 6. | Multiple epidermal growth factor-like domains protein 10. | 0.520 |
GAS6 | MERTK | A0A340XYG8 | A0A340YFQ2 | Growth arrest-specific protein 6. | Tyrosine-protein kinase Mer. | 0.992 |
GAS6 | P2RY12 | A0A340XYG8 | A0A340WDN6 | Growth arrest-specific protein 6. | LOW QUALITY PROTEIN: P2Y purinoceptor 12. | 0.449 |
GAS6 | TREM2 | A0A340XYG8 | A0A340XA19 | Growth arrest-specific protein 6. | Triggering receptor expressed on myeloid cells 2. | 0.529 |
GAS6 | TULP1 | A0A340XYG8 | A0A340Y6G7 | Growth arrest-specific protein 6. | Tubby-like protein; Belongs to the TUB family. | 0.700 |
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