Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06105.1Hypothetical protein; KEGG: eci:UTI89_C1705 5.3e-59 yddW; lipoprotein YddW precursor. (528 aa)    
Predicted Functional Partners:
EKF03678.1
N-acetylmuramoyl-L-alanine amidase; KEGG: npu:Npun_R6032 6.4e-244 cell wall hydrolase/autolysin K01448.
 
      0.786
EKF06104.1
Hypothetical protein.
       0.572
EKF05842.1
S-layer protein; KEGG: ava:Ava_3135 3.6e-28 hypothetical protein.
 
      0.568
EKF06106.1
5'-nucleotidase protein; KEGG: ava:Ava_3996 3.3e-215 metallophosphoesterase K01081; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
       0.526
EKF05367.1
Putative S-layer protein; KEGG: ava:Ava_3135 5.9e-44 hypothetical protein.
 
      0.422
EKF06060.1
U61 family peptidase; KEGG: npu:Npun_R1150 2.3e-136 peptidase U61, LD-carboxypeptidase A; Psort location: CytoplasmicMembrane, score: 8.46.
  
     0.411
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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