Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF06121.1 | EKF06122.1 | FDUTEX481_00057 | FDUTEX481_00058 | AMP-binding enzyme; KEGG: npu:Npun_R3431 1.6e-248 amino acid adenylation domain-containing protein. | Hypothetical protein; KEGG: cja:CJA_3717 0.55 dam; adenine-specific DNA methyltransferase. | 0.419 |
EKF06122.1 | EKF06121.1 | FDUTEX481_00058 | FDUTEX481_00057 | Hypothetical protein; KEGG: cja:CJA_3717 0.55 dam; adenine-specific DNA methyltransferase. | AMP-binding enzyme; KEGG: npu:Npun_R3431 1.6e-248 amino acid adenylation domain-containing protein. | 0.419 |
EKF06122.1 | EKF06123.1 | FDUTEX481_00058 | FDUTEX481_00059 | Hypothetical protein; KEGG: cja:CJA_3717 0.55 dam; adenine-specific DNA methyltransferase. | Hypothetical protein; KEGG: sat:SYN_02853 0.093 cyaA; adenylate cyclase K05851. | 0.457 |
EKF06123.1 | EKF06122.1 | FDUTEX481_00059 | FDUTEX481_00058 | Hypothetical protein; KEGG: sat:SYN_02853 0.093 cyaA; adenylate cyclase K05851. | Hypothetical protein; KEGG: cja:CJA_3717 0.55 dam; adenine-specific DNA methyltransferase. | 0.457 |