STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06126.1Tat pathway signal sequence domain protein; KEGG: lxx:Lxx06060 0.12 argD; acetylornithine aminotransferase; K00818 acetylornithine aminotransferase; Psort location: CytoplasmicMembrane, score: 9.82. (408 aa)    
Predicted Functional Partners:
EKF06127.1
Hypothetical protein; KEGG: det:DET0858 0.92 oxygen-independent coproporphyrinogen III oxidase, putative; K02495 oxygen-independent coproporphyrinogen III oxidase.
     0.936
EKF04832.1
Putative general stress response protein; KEGG: cpr:CPR_2504 0.14 punA; purine nucleoside phosphorylase K03783; Belongs to the UPF0337 (CsbD) family.
  
    0.508
EKF00653.1
CsbD-like protein; KEGG: bli:BL03961 0.21 ywhB; putative 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase; Belongs to the UPF0337 (CsbD) family.
  
    0.491
EKF04279.1
Hypothetical protein; KEGG: amr:AM1_3347 0.084 tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase; Belongs to the UPF0337 (CsbD) family.
  
    0.488
EKF06130.1
KEGG: reh:H16_A2563 2.9e-19 rpoE1; RNA polymerase sigma factor RpoE K03088; Psort location: Cytoplasmic, score: 9.26; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.441
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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