STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06166.1KEGG: ava:Ava_4605 4.1e-27 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase. (71 aa)    
Predicted Functional Partners:
EKF02576.1
Tautomerase enzyme; KEGG: hiq:CGSHiGG_00705 2.3e-19 anthranilate synthase component II K01658.
      
 0.599
EKF06165.1
Hypothetical protein; KEGG: ech:ECH_0905 0.015 pgpA; phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
       0.584
EKF06171.1
NHL repeat protein; KEGG: par:Psyc_0852 0.83 gluconolactonase; Psort location: Periplasmic, score: 9.83.
 
   
 0.563
EKF05785.1
Putative CRISPR-associated protein; KEGG: mea:Mex_1p1833 0.24 PAS/PAC sensor signal transduction histidine kinase (fragment).
  
     0.501
EKF06167.1
Hydrogenase expression/formation protein HypD; KEGG: pgi:PG0073 0.95 orotidine 5'-monophosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
       0.432
EKE99047.1
Rieske [2Fe-2S] domain protein; KEGG: azo:azo2514 5.6e-10 nagAb; putative ferredoxin K05710; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.431
EKF06164.1
KEGG: npu:Npun_R0359 5.7e-165 hydrogenase expression/formation protein HypE K04655; Psort location: Cytoplasmic, score: 8.96.
       0.413
EKF06169.1
KEGG: ecm:EcSMS35_2835 4.1e-146 hypF; [NiFe] hydrogenase maturation protein HypF K04656; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.411
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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