STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06194.1Metallo-beta-lactamase domain protein; KEGG: rha:RHA1_ro06806 7.9e-05 hydroxyacylglutathione hydrolase K01069. (237 aa)    
Predicted Functional Partners:
EKE98494.1
KEGG: sfu:Sfum_1398 1.5e-187 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00359 NADH oxidase.
  
 0.781
EKF02071.1
Ribonuclease II; KEGG: ava:Ava_1322 0. ribonuclease II K01147; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.735
EKF06195.1
m50B subfamily peptidase; KEGG: cyb:CYB_0218 7.9e-104 M50B family peptidase K01417; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.705
EKE99423.1
Hypothetical protein; KEGG: mst:Msp_1460 0.56 NAD(FAD)-dependent dehydrogenase; K03885 NADH dehydrogenase.
  
     0.696
EKE97787.1
Hypothetical protein; KEGG: mkm:Mkms_1965 0.60 gltX; glutamyl-tRNA synthetase K01885; Psort location: Cytoplasmic, score: 8.96.
  
     0.676
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
     
 0.667
EKF02763.1
Hypothetical protein; KEGG: bma:BMA1655 0.11 DNA-3-methyladenine glycosylase K01247.
  
     0.658
EKF02353.1
Putative H(+)transporting ATPase 1 subunit; KEGG: syg:sync_2319 1.3e-14 ATP synthase protein 1 K02116; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.658
EKF01846.1
KEGG: kla:KLLA0F08459g 0.35 hypothetical protein; K00670 peptide alpha-N-acetyltransferase.
  
     0.650
EKF04046.1
Exoribonuclease; KEGG: npu:Npun_F6222 0. VacB/RNase II family 3'-5' exoribonuclease K12573; Psort location: Cytoplasmic, score: 8.96; Belongs to the RNR ribonuclease family.
  
  
  0.648
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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