STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06204.1KEGG: bra:BRADO5373 4.1e-20 putative ABC transporter (permease protein) K02050; Psort location: CytoplasmicMembrane, score: 10.00. (268 aa)    
Predicted Functional Partners:
EKF06205.1
ABC transporter, ATP-binding protein; KEGG: oca:OCAR_4044 7.0e-64 aliphatic sulfonates import ATP-binding protein SsuB 1 K02049; Psort location: CytoplasmicMembrane, score: 10.00.
 0.988
EKF03163.1
KEGG: ava:Ava_1025 0. nitrate transport ATP-binding subunits C and D K11952; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.976
EKE99627.1
KEGG: ava:Ava_4542 0. nitrate transport ATP-binding subunits C and D K02049.
  
 0.971
EKF03164.1
KEGG: ana:alr2880 1.1e-138 cmpD; bicarbonate transport ATP-binding protein; K11953 bicarbonate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 0.933
EKE99626.1
KEGG: ava:Ava_4543 7.5e-131 nitrate transport ATP-binding subunits C and D K02049.
 0.930
EKF01557.1
KEGG: pen:PSEEN0148 5.4e-57 ABC transporter, ATP-binding protein K02049; Psort location: CytoplasmicMembrane, score: 10.00.
 0.925
EKF06209.1
Tat pathway signal sequence; KEGG: abu:Abu_1730 1.2e-16 two-component sensor histidine kinase.
 
  0.924
ssuB
ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 0.918
ssuB-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 0.918
EKE97853.1
KEGG: ava:Ava_0876 1.5e-125 nitrate transport ATP-binding subunits C and D K02049; Psort location: CytoplasmicMembrane, score: 9.82.
 0.876
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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