STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06211.1GTP cyclohydrolase II; KEGG: rop:ROP_03890 1.5e-157 putative GTP cyclohydrolase II; Psort location: Cytoplasmic, score: 8.96. (419 aa)    
Predicted Functional Partners:
EKF06212.1
Hypothetical protein; KEGG: ppp:PHYPADRAFT_108913 0.95 hypothetical protein; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 8.96.
     0.987
EKF05033.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
 0.972
EKF05898.1
KEGG: npu:Npun_R0059 2.8e-99 riboflavin synthase, alpha subunit; K00793 riboflavin synthase alpha chain; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.934
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.929
EKE96973.1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: npu:Npun_F1498 1.2e-50 CMP/dCMP deaminase, zinc-binding; Psort location: Cytoplasmic, score: 8.96.
 
 0.811
rpsB
Ribosomal protein S2; KEGG: afu:AF1100 0.11 cdhA-1; acetyl-CoA decarbonylase/synthase complex subunit alpha K00192; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.694
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
     0.689
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
     
 0.636
EKE98573.1
Riboflavin biosynthesis protein RibD protein; KEGG: ana:all4103 6.4e-86 ribG; riboflavin-specific deaminase; K00082 5-amino-6-(5-phosphoribosylamino)uracil reductase.
 
 
 0.614
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
 0.494
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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